STRINGSTRING
PSEEN4178 PSEEN4178 PSEEN4176 PSEEN4176 PSEEN4177 PSEEN4177 PSEEN4179 PSEEN4179 PSEEN4175 PSEEN4175 PSEEN4171 PSEEN4171 PSEEN4181 PSEEN4181 PSEEN4182 PSEEN4182 PSEEN4184 PSEEN4184 PSEEN4131 PSEEN4131 PSEEN4173 PSEEN4173
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEEN4178Putative prophage LambdaSo, minor tail protein M; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. (110 aa)    
Predicted Functional Partners:
PSEEN4176
Putative phage protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
  
 0.988
PSEEN4177
Putative phage tail protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
  
 0.984
PSEEN4179
Putative phage protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
  
 0.978
PSEEN4175
Putative phage tail protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
    0.973
PSEEN4171
Putative phage protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
    0.966
PSEEN4181
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.866
PSEEN4182
Putative phage Major tail protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
  
    0.828
PSEEN4184
Putative pyocin R2_PP, holin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
  
    0.738
PSEEN4131
Putative pyocin R2_PP, lytic enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
    0.648
PSEEN4173
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.607
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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